M. Ferhan, N. Yan and M. Sain (2015) Bark depolymerization during submerged fermentation using monofloral honey, a natural mediator substitute, and integration between laccases vs. bark biopolymers, characterized by Py-GC-MS. RSC Adv. 5: 14937–14952. DOI: 10.1039/C4RA13841D

M. Ferhan, N. Tanguy, N. Yan and M. Sain (2014) Comparison of enzymatic, alkaline and UV/H2O2 treatments for extraction of beetle infested lodgepole pine (BILP) and aspen bark polyphenolic extractives. ACS Sustainable Chem. Eng. 2: 165–172. DOI: 10.1021/SC400184f Published online: October 22, 2013

Ferhan M, Yan N and Sain M (2013) A new method for demethylation of lignin from woody biomass using biophysical methods. J Chem Eng Process Technol. 4: 160 DOI:10.4172/2157-7048.1000160

M. Ferhan, S. N. Santos (2013) Identification of a potential fungal species by 18S rDNA for ligninases production. World J Microbiol Biotechnol. 29 (12): 2437-2440.

Ferhan M, Leao AL, Itamar S de Melo, Yan N, Sain M (2012) Ligninases Production and Partial Purification of MnP from Brazilian Fungal Isolate in Submerged Fermentation. Ferment Technol Vol 1, Issue 5, doi:10.4172/2167-7972.1000106

Zafar Iqbal, Aamer Aleem, Ammara H. Tahir, Tariq Jameel Gill, Abid Sohail Taj,  Abdul Qayyum, Najeeb ur-Rehman, Muhammad Ferhan et al; (2011) Detection of BCR-ABL kinase domain mutations in CD34 cells from newly diagnosed chronic phase CML patients and their association with Imatinib resistance. Nature Precedings: hdl:10101/npre.2011.6645.1: Posted 23 Nov 2011

Ferhan, M. and Dahman, Y. (2010) Enhanced Biobutanol Production at Higher Temperature through Protoplast Fusion of Clostridial strains to Improve Thermal Stability" J. Chemical Technol.Biotechnol.

Zafar Iqbal; Akhtar Tanveer; Shahid Mahmood Baig; Zeba Aziz; Mudassar Iqbal; Muhammad Ferhan; et al; (2010) Presence of Prior-to-treatment BCR-ABL Mutations in CD34+CD38- Stem Cells of Newly Diagnosed Chronic Phase Untreated CML Patients and Their Correlation with Imatinib Resistance: Implications of Cancer Pharmacogenomics and Pre-Therapeutic Genetic Testing in Personalized Treatment of BCR-ABL+ Leukemia ). (Accepted for presentation in ASH Meeting 2010 and publication in Blood) Impact Factor: 10.555

Zafar Iqbal, Akhtar Tanveer, Mudassar Iqbal, Muhammad Ferhan, et al;  (2009) First comprehensive report of strong interplay of genetic and environmental factors as well as high degree of ethnic and geographical variations in biology of Leukemia as manifested by frequencies of common fusion oncogenes of prognostic significance associated with different Leukemic subtypes in Pakistani population. In: Proceedings of AACR (American Association for Cancer Research) Annual meeting 2009 to be held in Denver, Colorado, USA on April 18-22, 2009

Zafar Iqbal, Akhtar Tanveer, Mudassar Iqbal, Muhammad Ferhan, et al; (2008) BCR-ABL kinase domain mutations are present in a considerable number of CML patients before treatment and lead to resistance after initiation of Imatinib therapy: First large scale study on role of naturally-occurring BCR-ABL mutants in Imatinib resistance. . In: Proceedings of AACR (American Association for Cancer Research) Annual meeting 2008, Denver, Colorado.

Muhammad Ferhan, Muhammad Siddique Awan, and Tanveer Akhtar (2008) Solid State Fermentation Supported Enhanced Production of α-Galactosidase and Themostabilized the Production Process. International Biopharmaceutical Association Online publication in IBPA Career Newsletter - May 2008

Rajoka MI, Ferhan M, Khalid AM (2005) Kinetics and thermodynamics of ethanol production by a thermotolerant mutant of Saccharomyces cerevisiae in a microprocessor-controlled bioreactor. Lett Appl Microbiol. 40(5): 316-321.

Muhammad Ferhan (2003) Biodegradation of trichloroethylene (TCE) in the presence of phenolic compounds. J. Biological Sci. 3(11): 973-983.

Muhammad Ferhan, Zahoor Ahmed, S. Riazuddin, M.I.  Rajoka and A.M. Khalid (2002) Estimation and Removal of Phenol in Pharmaceutical Industrial Effluents from Paracetamol and Aspirin Manufacturing Units. Online J. Biological Sci. 2(9): 587-590.